2024
Jiang J., Keniya M.V., Puri A., Zhan X., Cheng J., Wang H., Lin. G, Lee Y.K., Jaber N., Hassoun Y., Shor E., Shi Z., Lee S.H., Xu M., Perlin D.S., Dai W. (2024), Structural and Biophysical Dynamics of Fungal Plasma Membrane Proteins and Implications for Echinocandin Action in Candida glabrata. BioRxiv.
Rizvi A., Favetta B., Jaber N., Lee Y.K., Jiang J., Idris N.S., Schuster B.S., Dai W., Patterson J.P. (2024), Revealing Nanoscale Structure and Interfaces of Protein and Polymer Condensates via Cryo-Electron Microscopy. Nanoscale.
Rizvi A., Favetta B., Jaber N., Lee Y.K., Jiang J., Idris N.S., Schuster B.S., Dai W., Patterson J.P. (2024), Revealing Nanoscale Structure and Interfaces of Protein and Polymer Condensates via Cryo-Electron Microscopy. Nanoscale.
2023
Basu S., Song M., Adams L., Jeong I., Je G., Guhathakurta S., Jiang J., Boparai N., Dai W., Cardozo-Pelaez F., Tatulian S.A., Han K.Y., Elliott J., Baum J., McLean P.J., Dickson D.W., Kim Y.S. (2023), Transcriptional mutagenesis of alpha-synuclein caused by DNA oxidation in Parkinson's disease pathogenesis. Acta Neuropathologica.
2022
Hu J., Li J., Jiang J., Wang L., Roth J., McGuinness K.N., Baum J., Dai W., Sun Y., Nanda V., Xu F. (2022), Design of synthetic collagens that assemble into supramolecular banded fibers as a functional biomaterial testbed. Nature Communications.
2021
Turk L. S., Kuang X., Pozzo V. D., Khush Patel K., Chen M., Huynh K., Currie M. J., Mitchell D., Dobson, R., D’Arcangelo G., Dai W.*, Davide Comoletti D.* (2021), The structure - function relationship of a signaling competent, dimeric Reelin fragment, Structure. S0969-2126 (21)00170-2. Doi: 10.1016/j.str.2021.05.012.
Jiang J., Cheong K. Y., Falkowski P. G., Dai, W. (2021), Integrating On-grid Immunogold labeling and Cryo-Electron Tomography to Reveal Photosystem II Structure and Spatial Distribution in Thylakoid Membranes, J. Struct. Biol. 107746. Doi: 10.1016/j.jsb.2021.107746.
Kuang, X., Nunn, K., Jiang, J., Castellano, P., Hardikar, U., Horgan, A., Kong, J., Tan, Z., Dai, W. (2021), Structural insight into transmissive mutant huntingtin species by correlative light and electron microscopy and cryo-electron tomography, Biochem Biophys Res Commun. 560: 99-104.
Jiménez-Ortigosa C., Jiang J., Chen M., Kuang, X., Healey K. R., Castellano P., Boparai N., Ludtke S. J., Perlin D. S., and Dai W. (2021), Cryo-Electron Tomography of Candida glabrata Plasma Membrane Proteins, Journal of Fungi. 7 (2), 120.
Nunn, K., Castellano, P., Jiang, J., Tan, Z., Dai, W. (2021), Visualizing Transmissive Mutant Huntingtin by Correlative Light and Electron Microscopy and Cryo-electron Tomography. Microsc. Microanal., 27 (S1).
Nunn, K., Kuang, X., Castellano, P., Jiang, J., Horgan, A., Kong, J., Tan, Z., Dai, W. (2021), Extracellular Vesicles Modulate Formation of Transmissive Mutant Huntingtin Assemblies. Microsc. Microanal., 27 (S1).
Jiang J., Cheong K. Y., Falkowski P. G., Dai, W. (2021), Integrating On-grid Immunogold labeling and Cryo-Electron Tomography to Reveal Photosystem II Structure and Spatial Distribution in Thylakoid Membranes, J. Struct. Biol. 107746. Doi: 10.1016/j.jsb.2021.107746.
Kuang, X., Nunn, K., Jiang, J., Castellano, P., Hardikar, U., Horgan, A., Kong, J., Tan, Z., Dai, W. (2021), Structural insight into transmissive mutant huntingtin species by correlative light and electron microscopy and cryo-electron tomography, Biochem Biophys Res Commun. 560: 99-104.
Jiménez-Ortigosa C., Jiang J., Chen M., Kuang, X., Healey K. R., Castellano P., Boparai N., Ludtke S. J., Perlin D. S., and Dai W. (2021), Cryo-Electron Tomography of Candida glabrata Plasma Membrane Proteins, Journal of Fungi. 7 (2), 120.
Nunn, K., Castellano, P., Jiang, J., Tan, Z., Dai, W. (2021), Visualizing Transmissive Mutant Huntingtin by Correlative Light and Electron Microscopy and Cryo-electron Tomography. Microsc. Microanal., 27 (S1).
Nunn, K., Kuang, X., Castellano, P., Jiang, J., Horgan, A., Kong, J., Tan, Z., Dai, W. (2021), Extracellular Vesicles Modulate Formation of Transmissive Mutant Huntingtin Assemblies. Microsc. Microanal., 27 (S1).
2020
Muscarella A. M., Dai W., Mitchell P. G, Zhang W., Wang H., Jia L., Stossi F., Mancini M., Chiu W., and Zhang X. H.-F, (2020), Unique cellular protrusions mediate breast cancer cell migration by tethering to osteogenic cells. npj Breast Cancer 6: 42.
2019
Levitan O., Chen M., Kuang X., Cheong K. Y., Jiang J., Banal M., Nambiar N., Ludtke S. J., Falkowski P. G., and Dai W. (2019), Structural and functional analyses of photosystem II reaction centers in thylakoid membranes of a marine diatom. PNAS, 116 (35): 17316 - 17322.
Hernández N. E., Hansen W. A, Zhu D., Shea M.E., Manichev V., Putnins M., Chen M., Anthony G. Dodge A. G., Yang L., Banal M., Gustafsson T., Leonard C. Feldman L. C., Lee S., Wackett L. P., Dai W. and Khare S., (2019), Stimulus-responsive self-assembly of protein based fractals by computational design, Nat. Chem., 11 (7): 605-614.
Hernández N. E., Hansen W. A, Zhu D., Shea M.E., Manichev V., Putnins M., Chen M., Anthony G. Dodge A. G., Yang L., Banal M., Gustafsson T., Leonard C. Feldman L. C., Lee S., Wackett L. P., Dai W. and Khare S., (2019), Stimulus-responsive self-assembly of protein based fractals by computational design, Nat. Chem., 11 (7): 605-614.
2018
Chen J. Y., Parekh M., Seliman H., Bakshinskaya D., Dai W., Kwan K., Chen K. Y., Liu A. Y. C., (2018), Heat shock promotes inclusion body formation of mutant huntingtin (mHtt) and alleviates mHtt-induced transcription factor dysfunction, J. Biol. Chem.,293: 15581-15593.
Dai W., Chen M., Myers C., Ludtke S. J., Pettitt B. M., King J. A., Schmid M. F., Chiu W., (2018), Visualizing individual RuBisCO and its assembly into carboxysomes in marine cyanobacteria by cryo-electron tomography. J. Mol. Biol., 430 (21): 4156-4167.
Dai W., Chen M., Myers C., Ludtke S. J., Pettitt B. M., King J. A., Schmid M. F., Chiu W., (2018), Visualizing individual RuBisCO and its assembly into carboxysomes in marine cyanobacteria by cryo-electron tomography. J. Mol. Biol., 430 (21): 4156-4167.
2017
Chen, M., Dai, W., Sun, S. Y., Jonasch, D., He, C. Y., Schmid, M. F., Chiu, W., and Ludtke, S. J., (2017), Convolutional neural networks for automated annotation of cellular cryo-electron tomograms. Nature Methods. 14: 983-985 13.
Chen, M., Dai, W., Sun, S. Y., Schmid, M. F., Chiu, W., and Ludtke, S. J., (2017), Going deeper in cryo electron tomography with neural networks. Microsc. Microanal., 23 (S1), 814-815.
Luengo, I., Darrow, M.C., Spink, M.C., Sun, Y., Dai, W., He, C.Y., Chiu, W., Pridmore, T., Ashton, A.W., Duke, E.M.H., Basham, M., Andrew P. French, A.P, (2017). SuRVoS: super-region volume segmentation workbench. J. Struct. Biol. 198 (1): 43-53. 15.
Chen, M., Dai, W., Sun, S. Y., Schmid, M. F., Chiu, W., and Ludtke, S. J., (2017), Going deeper in cryo electron tomography with neural networks. Microsc. Microanal., 23 (S1), 814-815.
Luengo, I., Darrow, M.C., Spink, M.C., Sun, Y., Dai, W., He, C.Y., Chiu, W., Pridmore, T., Ashton, A.W., Duke, E.M.H., Basham, M., Andrew P. French, A.P, (2017). SuRVoS: super-region volume segmentation workbench. J. Struct. Biol. 198 (1): 43-53. 15.
2016
Darrow, M.C., Dai, W., Mitchell, P.G., Luengo, I., Chiu, W., Duke, E.M.H., (2016). Organelle changes in a Huntington’s Disease model using cryogenic soft X-ray tomography. European Microscopy Congress 2016: Proceedings. 284-285.
Hecksel, C.W., Darrow, M.C., Dai, W., Galaz-Montoya, J.G., Chin, J.A., Mitchell, P.G., Chen S., Jakana, J., Schmid M. F., Chiu, W., (2016). Quantifying variability of manual annotation in cryo-electron tomograms. Microsc Microanal. 22 (3), 487-496.
Hecksel, C.W., Darrow, M.C., Dai, W., Galaz-Montoya, J.G., Chin, J.A., Mitchell, P.G., Chen S., Jakana, J., Schmid M. F., Chiu, W., (2016). Quantifying variability of manual annotation in cryo-electron tomograms. Microsc Microanal. 22 (3), 487-496.
2015
Tan, Z., Dai, W., van Erp, T.G.M., Overman, J., Demuro, A., Digman, M.A., et al. (2015). Huntington’s disease cerebrospinal fluid seeds aggregation of mutant Huntingtin. Mol. Psychiatry20 (11), 1286-1293.
2014
Dai, W., Fu, C., Khant, H.A., Ludtke, S.J., Schmid, M.F., and Chiu, W. (2014). Zernike phase-contrast electron cryotomography applied to marine cyanobacteria infected with cyanophages. Nat Protoc 9, 2630-2642.
Dai, W., Schmid, M.F., King, J.A., and Chiu, W. (2014). Identifying the assembly pathway of cyanophage inside the marine bacterium using electron cryo-tomography. Microbial Cell 1, 45-47.
Chiu, W., Dai, W., Fu, C., Raytcheva, D., Flanagna, J., Khant, H.A., et al. (2014). Visualizing virus assembly intermediates inside marine cyanobacteria by zernike phase contrast electron cryo-tomography. Microsc. Microanal., 20 (S3), 202-203.
Dai, W., Schmid, M.F., King, J.A., and Chiu, W. (2014). Identifying the assembly pathway of cyanophage inside the marine bacterium using electron cryo-tomography. Microbial Cell 1, 45-47.
Chiu, W., Dai, W., Fu, C., Raytcheva, D., Flanagna, J., Khant, H.A., et al. (2014). Visualizing virus assembly intermediates inside marine cyanobacteria by zernike phase contrast electron cryo-tomography. Microsc. Microanal., 20 (S3), 202-203.
2013 - OLDER
Dai, W., Fu, C., Raytcheva, D., Flanagan, J., Khant, H.A., Liu, X., Rochat, R.H., Haase-Pettingell, C., et al. (2013). Visualizing virus assembly intermediates inside marine cyanobacteria. Nature 502, 707-710.
Yu, X., Shah, S., Lee, M., Dai, W., Lo, P., Britt, W., Zhu, H., Liu, F., et al. (2011) Biochemical and structural characterization of the capsid-bound tegument proteins of human cytomegalovirus. J. Struct. Biol. 174 (3), 451-460.
Dai, W., Hodes, A., Hui, W.H., Gingery, M., Miller, J.F., and Zhou, Z.H. (2010). Three-dimensional structure of tropism-switching Bordetella bacteriophage. PNAS 107, 4347-4352.
Dai, W., Jia, Q., Bortz, E., Shah, S., Liu, J., Atanasov, I., Li, X., Taylor, K.A., et al. (2007). Unique structures in a tumor herpesvirus revealed by cryo-electron tomography and microscopy, J. Struct. Biol. 161, 428-438.
Dai, W., Hodes, A., Hui, W., Ge, P., Atanasov, I., Miller, J., Zhou, Z.H., (2006). Structural organization of tropism-switching bordetella bacteriophage revealed by integrative electron cryotomography and cryomicroscopy, Microsc. Microanal., 12 (S02), 418-419.
Dai, W., Liang, Y., and Zhou, Z.H. (2003). Web portal to an image database for high-resolution three-dimensional reconstruction, J. Struct. Biol. 144, 238-245.
Yu, X., Shah, S., Lee, M., Dai, W., Lo, P., Britt, W., Zhu, H., Liu, F., et al. (2011) Biochemical and structural characterization of the capsid-bound tegument proteins of human cytomegalovirus. J. Struct. Biol. 174 (3), 451-460.
Dai, W., Hodes, A., Hui, W.H., Gingery, M., Miller, J.F., and Zhou, Z.H. (2010). Three-dimensional structure of tropism-switching Bordetella bacteriophage. PNAS 107, 4347-4352.
Dai, W., Jia, Q., Bortz, E., Shah, S., Liu, J., Atanasov, I., Li, X., Taylor, K.A., et al. (2007). Unique structures in a tumor herpesvirus revealed by cryo-electron tomography and microscopy, J. Struct. Biol. 161, 428-438.
Dai, W., Hodes, A., Hui, W., Ge, P., Atanasov, I., Miller, J., Zhou, Z.H., (2006). Structural organization of tropism-switching bordetella bacteriophage revealed by integrative electron cryotomography and cryomicroscopy, Microsc. Microanal., 12 (S02), 418-419.
Dai, W., Liang, Y., and Zhou, Z.H. (2003). Web portal to an image database for high-resolution three-dimensional reconstruction, J. Struct. Biol. 144, 238-245.